Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKHHLSKKLFFAGLVLFIIGAIGVAFTMNTGKMIEKGEPLTKQWDLSTENIKKIAFSSERDASIEWKESTTGKNYIELKGNYSANDKKAIQQLEPVSEDGTSFDITVPEEDDWYNGFGKIYAYGKQKVTIYLTKDTKLADLEVKSHSGDIDVADFKVKKF-VSS-TNSGELKVTN-LEANTAQMA-TSSGDLTLSNIKANSSIETDSG--KTELTNLTGDLEVNG-GSGDVNVAGVKAKKLKIAIDSGDIELTSGTVTDLAVLTTSSGDIDANTKGKIQAES-DSGSIELAGATNNVTAKTSSGDIDVAFTKQVKNIEINSDSGEVELELPGDFKAIYEASSNSGSVKAPTSDSNTDNRVTVKTSSGDIKIEK |
| 3JX8 Chain:A ((4-250)) | --------------------------------DKRIDGNGNPETREIKISDYDEITFVG--SADFEYEQSDKAP-YLSVTID-----ENLFDYLVTEVEGG---TLKIYPKSIKKGFNNNSYDLRPTVYKIKSNSK-ELKELNTVG-SGSFIISKPTKVNRMEINMAGSGNVELRGPVKGYKLECNMAGSGNIIAKDIQLDNLSCSLASSGEIEVIGTVDRASFNVAGSGEIKAFDCQARKAECNIA-SSGEISVYATQILDANIVGSGEIHYKGDPEISKSIMGSGSINKVK--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 33997 for 1951 contacts (17.4/contact) +
2D Compatibility (PS) -24575 + (NN) -2092 + (LL) 6452
1D Compatibility (HY) -4400 + (ID) 1950
Total energy: 7432.0 ( 3.81 by residue)
QMean score : 0.219
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