Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MHPIEQLLANNNTTATDIESNTRLKEGSLQKIIDKDIR-TSDISLRVLSQIAIFLNTGADIIAKQLSDIEVANDLAFLIED-------------
3LFP Chain:A ((1-96))
MLIRRLKDARLRAGISQEKLGVLAGIDEASASARMNQYEKGKHAPDFEMANRLAKVLKIPVSYLYTPEDDLAQIILTWNELNEQERKRINFYIRKK
General information:
TITO was launched using:
RESULT:
Template:
3LFP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13994 for 542 contacts (-25.8/contact) +
2D Compatibility (PS) -8489 + (NN) -1332 + (LL) 0
1D Compatibility (HY) -400 + (ID) 250
Total energy: -24465.0 ( -45.14 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_3LFP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LFP-query.scw
PDB file :
Tito_Scwrl_3LFP.pdb
: