Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LVIENRDFIQISTEKIKKEINNQKLVEMYKRCMENTLDTTIKI--RDSGLTFILTGDIPAMWLRDSVCQVRPFLIFAKENEE-IESMLIGLSKEQVSLVEIDPYANAFNETPNGAGHQADKTEMHPQVWERKYEIDSLCYPIQLAYLIWKITGRTEQFDAAFFKMLQTIFALWEVEQHHETKSPYRFERLDCVPSDTLKRNGLGTETAYTGMLWSGFRPSDDACEYGYLIPSNMFAVVVLGYAKEIIEAFYPSEIETIKQAATLQNDIQLGIEKFGTYNHPTFGEIFAFEVDGLGNQLLMDDANVPSLLSMPIIEYLEKESPIYQNTRKFILSKSNPYYFEGKLAKGIGSPHTPAGYIWPIGLAIQGLT-ASDKSEKLEILQM--LLRTDAGTGLMHESFHPDYPED-----FTRE-WFSWANMMFCELVLDVAGFRMANVLKN |
| 2OKX Chain:A ((542-881)) | --------------------SDALLNATWEISR-HTTRLCMEDTFVDCPSY-----E-QVFWVGDSRNEALVNYYVF-GETEIVERCLNLVPGSAD----ETPLY---L-----DQV------PSA--W-SSVIPNWTFFWILACREYAAHTGNEAFAARIW-PAVKHTLTHYLEHIDD--SGLLNM------------------A--GWNL--LDWAPIDQ-PNEGIVTHQNLFLVKALRDSRALAAAAGAT--EEADAFAARADLLAETINAVLWDEEKR---AYIDCIHADGRRS--DVYSMQTQVVAYLCGVAQGER---EAVIEGYLSS--PP---------PAFVQI--GSPFMSFFYYEALEKAGRQTLMLDDIRRNYGQMLRYDATTCWEMYPNFAENRSNPDMLTRSHCHAWSAAPGYFLGSSILGVKR------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OKX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164570 for 2904 contacts (-56.7/contact) +
2D Compatibility (PS) -34803 + (NN) -14984 + (LL) 7224
1D Compatibility (HY) 2000 + (ID) 2050
Total energy: -207183.0 ( -71.34 by residue)
QMean score : 0.447
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