Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQLLKIFVPVIVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYIDPSLITKFEKETGIKVIYQTFDSNEAMMTKIEQGGTTFDIAVPSDYAISKMKEENLLIPLDHSKLPNEKYLDPRFMDL---SFDDDNKYSMPYFWGTLGIIYNKEMFPDK-N---FDTWNALFDP----ELKN-QILLIDGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLLMADNEAGVAVTFSGEAAEMLS------ENEDLEYVIPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPENAAINAEYVGYATPNAKAVELLPKEISSDERFYPDMDELNNLEVYDNLGKRMLSYYNELFLEFKMYRK
3TTN Chain:A ((6-340))-----------------------------------SLHIYNWTDYIAPTTLKDFTKESGIDVSYDVFDSNETLEGKLVSGHSGYDIVVPSNNFLGKQIQAGAFQKLDKSKLPNWKNLDPALLKQLEVSDP-GNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMDSGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQAVLDKLYVSAVLPAKVLRLQTRTWTRIK----


General information:
TITO was launched using:
RESULT:

Template: 3TTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138238 for 2734 contacts (-50.6/contact) +
2D Compatibility (PS) -34755 + (NN) -18346 + (LL) 3964
1D Compatibility (HY) -22400 + (ID) 5850
Total energy: -215625.0 ( -78.87 by residue)
QMean score : 0.503

(partial model without unconserved sides chains):
PDB file : Tito_3TTN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TTN-query.scw
PDB file : Tito_Scwrl_3TTN.pdb: