Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VNPAYFVLLVEELKTKYLVKDICQILQVPLSTYYRWKKKDFSQSSLEKKIGQLCKAYQFTYGYRKIAALMKQEEQVGINKVQRIMQKYQWQCQVKVKKKNRPGSAYYQTENHLNRNFQASQPLEKLTTDI-TYLYFGDCRLYLSSIMDLYNGEIVAYSIGEKQDTELVLDTLNQLS-LPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHSSLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA |
| 2X78 Chain:A ((119-279)) | -----------------------------------------------------------------------------------------------------------------------QKPFDKFFIDYIGPLPPSQGYLYVLVVVDGMTGFTWLYPTKA-PSTSATVKSLNVLTSIAIPRVIHSDQGAAFTSSTFAEWAKERGIHLEFST-------SKVERKNSDIKRLLTKLLV---GRPTKWYDLLPVVQLALNN-TYSPVLK-YTPHQLLF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38873 for 1062 contacts (-36.6/contact) +
2D Compatibility (PS) -14780 + (NN) -3270 + (LL) 10904
1D Compatibility (HY) -4000 + (ID) 1400
Total energy: -51419.0 ( -48.42 by residue)
QMean score : 0.296
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