Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKEIIQTSSAPKALGPYSQAVKVNGLIFTSGQLGINPATGELVVGAT-KQAEQAFKNLAAVLEEAGSGLDKIIKATVFFKDLNEFKAVNEVYATFFSSDFPARSAFQVAKLPLDAEIEIEVIAEA
1XRG Chain:B ((34-154))
---EVVKTNKAPEAIGPYSQAIVTGSFVYTSGQIPINPQTGEVVDGGIEEQAKQVLENLKNVLEAAGSSLNKVVKTTVFIKDMDSFAKVNEVYAKYFSEPYPARSCVEVSKLPKGVLIEIEAVA--
General information:
TITO was launched using:
RESULT:
Template:
1XRG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46140 for 896 contacts (-51.5/contact) +
2D Compatibility (PS) -13443 + (NN) -8305 + (LL) 664
1D Compatibility (HY) -12800 + (ID) 3200
Total energy: -83224.0 ( -92.88 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_1XRG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XRG-query.scw
PDB file :
Tito_Scwrl_1XRG.pdb
: