Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQVAPFYADHVGSILRTKGIKDAREKFQSGEITALELRKIENTEIKYIVEKQKEVGLKSITDGEFRRAWWHFDFLENLDGVEGYDAAGGIQFSKVQTKSHSVKITGPIDFTTHPFIEDFIFLKEAVGDNHVAKQTIPSPAMLHYRGDIE-----YQ----PYLDD---AEKFANDLATAYQKAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPA-----DM--VITMHICRGNFRSTWIAEGGYGPVAETLFGKLNIDGFFLEYDNERSGDFAPLKYVTRPDLKIVLGLITSKTGELEDEAAIKARIEEASEIVPLSQLRLSPQCGFASTEEGNILTEEEQWDKLRYVVRLANDIWGE |
| 1R3S Chain:A ((135-362)) | --------------------------------------------------------------------------------------------------------------------FQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFESHA-G-------------HLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDG-H----------FALEEL-AQAGYEVVGLDWTV----APKKARECVGK-TVTLQGNLDPCAL-YASEEEIGQLVKQMLDDFGPHRYIANLGHGLYP---------DMDPEHVGAFVDAVHKHSR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R3S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85691 for 1621 contacts (-52.9/contact) +
2D Compatibility (PS) -22861 + (NN) -9336 + (LL) 10040
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -110948.0 ( -68.44 by residue)
QMean score : 0.480
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