Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKDIDWSNLGFSYIKTDKRYISYWK-DGEWDEGALTEDNTLHISEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDRNAARIQKSCERLLMPHIPTEKFIDAVMQVVRANEEFVPPYGTGATLYLRPFVIGVGDNIGVHAAPEYIFSVFCSPVGPYFKGGMAPTNFIVS-DFDRAAPNGTGAAKVGGNYAASLLPGQAAKERNFGDCIYLDPATHTKIEEVGSANFF--GITKD--DKFVT-PYSPSILPSITKYSLLYLAEHRLGLEAVEGDVYIDKL------DEFKEAGACGTAAVITPIGGIQTK-DDFHVFHSETEVGP-VTKRLFDELCGIQFGDVEAPEGWIYKVK |
| 2COG Chain:B ((43-378)) | -----DPNNLVFGTVFTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWV-PYSTSASLYIRPTFIGTEPSLGVKKPTKALLFVLLSPVGPYF---FNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDNGCQQVLWLYGEDH-QITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAHQWGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHI--PTMENGPKLASRILSKLTDIQYGREE---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2COG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147230 for 2531 contacts (-58.2/contact) +
2D Compatibility (PS) -34118 + (NN) -11205 + (LL) 888
1D Compatibility (HY) -25600 + (ID) 5550
Total energy: -222815.0 ( -88.03 by residue)
QMean score : 0.474
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