Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVKKAVIPAAGLGTRFLPATKAMPKEILPIVDKPTIQFIVEEAVASGIEDILIVTGKGKRAIEDHFDSVPELENNLREKNKLDLLHLVEETT-NINLHFIRQSKPKGLGDAILQAKGFIGNEPFVVMLGDDIVQSKT--PCAKQLIDQYEKTHSSVIGVQNVPREETYRYGIIDPDKEVSDRLYNVTGFVEKPNVEDAPSNLAILGRYLLTPEIFKYLETQEAGSGGEIQLTDAINRLNEIQPVFAYDFEGERFDVGDKFGFIETTLKFALKHPEIKDDVRDLIIRLGDELK |
3JUK Chain:B ((2-265)) | --IKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSY---------NKENALKSIRNIIEKCCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQCSIVAIEEVALEEVSKYGVIRGE-WLEEGVYEIKDMVEKPNQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRTQAKRKRIIAYQFKGKRYDCGSVEGYIEAS-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JUK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136295 for 2146 contacts (-63.5/contact) +
2D Compatibility (PS) -27834 + (NN) -14903 + (LL) 3056
1D Compatibility (HY) -24800 + (ID) 5800
Total energy: -206576.0 ( -96.26 by residue)
QMean score : 0.485
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