Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEIRERILADMQVAETIDAHEEIRKSVEFLKAYLKKNTFLKSFVLGISGGQDSTLTGKLAQMAISEMRAETGDDEYRFFAVSLPYGTQLDESDRQDALNFMEPDNRLTVNIKASVDASVAALAEA-GVELSDFAKGNEKARERMKVQYAIAAMHKGVVVGTDHSAEAVTGFYTKYGDGGTDINPLFRLNKRQGKALLKELGCPEHLYLKKPTADLEDNKPALPDEVALGVTYDQIDDYLEGKEVPADAAAKIENWFIKTEHKRHMAITIFDDFWK |
4Q16 Chain:D ((11-280)) | --LRSHIIRELHVQPDIDPGAEVERRVAFLCDYLQ-STPTKGFVLGISGGQDSTLAGRLCQLAVERRRSQ--GHGATFLAVRLPYGVQADEADAQQALDFIQADREVTVNIKEAADASVAAAQAALGSEVRDFVRGNVKARERMVAQYALAGQENLLVVGTDHAAEALTGFYTKYGDGGVDLTPLSGLTKRQGAQLLAHLGAPEGTWRKVPTAD----RPGLPDEVALGVTYAQIDAYLEGREVSDEAAARLERLFLNSRHKRALPVTPFDGWWQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38054 for 2132 contacts (-17.8/contact) +
2D Compatibility (PS) -29246 + (NN) -17109 + (LL) 380
1D Compatibility (HY) -21600 + (ID) 7300
Total energy: -112929.0 ( -52.97 by residue)
QMean score : 0.496
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