Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LNNKTSWIEELKEKRMAYGLSQNKLAVASGITRQYLSDIENEKVIPTEQVKTALLDSLERFNPDNPLEMLFDYVRIRFPTDNVEKIIEEILHLNIDYMIHEDFGYYSYPEHYRFGDIMVMVSYDITKGVLLELKGKGCRQYENFLLAQHRSWYDFFTDCLEVNGVFKRLDLAINDKVGILDIPELARKSEQEECISIFRTFKNYRSGELVHRDEKSDMGNTLYIGSLKSEVYFCIYEKDYEQFIKNDIPLEDPEVKNRFEIRLKNDRATHAIQDLLAYRNAEKTAFEIINRYIRFADKDTTKRRSQWQTSERWEWFIGKNRGELRLTTKPEPYSYERTLNWLRHQVAPTLKVASILDVLNETDIIPAMIRDANLTEKHEKLIEQQNLAVEDVIV |
| 2WIU Chain:B ((9-78)) | --SPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLEL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3468 for 379 contacts (-9.2/contact) +
2D Compatibility (PS) -6431 + (NN) -2675 + (LL) 25136
1D Compatibility (HY) -800 + (ID) 850
Total energy: 10912.0 ( 28.79 by residue)
QMean score : 0.564
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