Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELTKENFQKLDLIHLSLENRHSMSEIIDILSESYIEITQS--GVV-KDYAYYKSLTTLG---DSNLAIMEYDVKILDETKVLSYY-KLKNLS--E----NNYTMRSNIWIFENGSWKLTFHQGTRII
2F86 Chain:B ((348-471))
--AQKQDIVRVTQTLLDAISCKDFETYTRLCDTSMTCFEPEALGNLIEGIEFHRFYFDGNRKNQVHTTMLNPNVHIIGEDAACVAYVKLTQFLDRNGEAHTRQSQESRVWSKKQGRWVCVHVHRST--
General information:
TITO was launched using:
RESULT:
Template:
2F86.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15488 for 716 contacts (-21.6/contact) +
2D Compatibility (PS) -11883 + (NN) 1175 + (LL) 720
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -29376.0 ( -41.03 by residue)
QMean score : 0.378
(partial model without unconserved sides chains):
PDB file :
Tito_2F86.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F86-query.scw
PDB file :
Tito_Scwrl_2F86.pdb
: