Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSQMSILEKIKDAGVVGCGGAGFPTHAKFSGEVEYLIINAAECEPLLKTDHFVM-------RNHAVETIKAIEMVKSQVGAEFAVIATK-RYYTEEIAALRSAITELDASVTIHEMDNVYPTGDEQVMVFE--VTGRVVPPSGIPLMVGCIVSNVSTMWNVFHAIQDD-APVVRKQLTVTGAVGEPKLLDVPVGTPFEVCLAAAGGTNLDEYLFLDGGPMMGKLNDQSTIADKVVT--KTTSGLIVAEDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRQQLGHDIHPHKVMRHFAVAEDITDIKPDPIWEEAMICCECGICEVIACPMGLSPRQVNIHVKKELLKQGVRYQTDKKEFTPDPMREYKSIAPKNILIKMGLQQYADVHLEKMHYLEVDEVFIPTKMHIGAPSIPVVSEGDIVKKGDLIAKIPDTALGAN-IHASIDGQIIRITEEQVHIKKVMS-------------- |
| 4XGC Chain:D ((5-457)) | DRELVSIRRFLKERLQR-DYTTLRGYAKERSNVRLLLQRTAEMG---ESNSLLLLGPRGSGKTTLINSVLADLLPNKSFGENTLIVHLDGNLHTDDRVALKSITVQMQLENAAD--GKVFGSFAENLAFLLQCLKSKSVIFILEEFDLFCAHHNQTLLYNLFDVSQSAQAPICV--LGVTCRLDVIELLEKRVKSRF---------SHRQVFLF----PSLRRFEDYVDLCRDLLSLPTGNSLLLAAEKIYNLQNIQSGALYFSRNHFDPGEYGFS------PRLRDAWNKQICKVLATQQARSTLQALHDFDISEAYLKNFLFRLVA------HLRPQSPHITAEK-MAAVGSQFEGD------DKIELLCGLSVLELCLIIAIKHHSQIY--DRDSFNFEIIYARFSKFAKVSTTMQAVERSIVLKAFEHLRIAELIMPLTKVQKEFEMHKLALTYSQIHHCMQRYQALPTEVAQWAQSS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126452 for 3086 contacts (-41.0/contact) +
2D Compatibility (PS) -42793 + (NN) -4870 + (LL) 2820
1D Compatibility (HY) -16000 + (ID) 3050
Total energy: -190345.0 ( -61.68 by residue)
QMean score : 0.202
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