Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTLGAEPEIQAE-LEQIQQQLFDAGGDLAT-----EEGKRAYKLTSEPVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFAVARVVNYRAGETD-IFYKNSELVFRNKKK
2IDX Chain:B ((3-186))
-KIYTKTGDKGFSSTFTGERRPKDDQVFEAVGTTDELSSAIGFALELVTEKGHTFAEELQKIQCTLQDVGSALATPCSSA-----YTTFKAGPILELEQWIDKYTSQLPPLTAFILPSGGKISSALHFCRAVCRRAERRVVPLVQMGETDANVAKFLNRLSDYLFTLARYAAMKEGNQEKIYMK-----------
General information:
TITO was launched using:
RESULT:
Template:
2IDX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63313 for 1254 contacts (-50.5/contact) +
2D Compatibility (PS) -18673 + (NN) -9134 + (LL) 1116
1D Compatibility (HY) -12800 + (ID) 3450
Total energy: -106254.0 ( -84.73 by residue)
QMean score : 0.403
(partial model without unconserved sides chains):
PDB file :
Tito_2IDX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IDX-query.scw
PDB file :
Tito_Scwrl_2IDX.pdb
: