Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNIQAMRKKVEVQIADLQNETDEIAEFNQAKVLDAFQENKVSDFHFHPSTGYGYDD---EGRDTLEHVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGMRNQGQGSLKDFHIGYSSVPLLENGDVDFPLIAEKMT-RKTKMIGIQRSRGYADRPSFTIDKIKEMIIFVKNINPEVIVFVDNCYGEFAEYLEPTEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALIDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVTAQAIKGARFTAAMLAEF-GVV-A-DPT------WDAP-----RTDLIQSISFHNK-EKMVAFAQAIQAASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHVKIAVTRAIQKTL |
| 1QGN Chain:A ((105-444)) | ---------------------------------------------------SFEYGRYGNPTTVVLEEKISALEGAESTLL---MASGMCASTVMLLALVPAGGHIVT-TTDCYRKTRIFI------ETILPKMGITATVIDPA-----DVGALELALNQKKVNLFFTESP----TNPFLRCVDIELVSKLCHEK--GALVCIDGTFATPLN-QKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHHI--LGG--ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAPS--------FGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGVEDFDDLKADILQALDS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QGN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177513 for 2792 contacts (-63.6/contact) +
2D Compatibility (PS) -34562 + (NN) -15573 + (LL) 5160
1D Compatibility (HY) -8000 + (ID) 2550
Total energy: -233038.0 ( -83.47 by residue)
QMean score : 0.403
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