Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKVLEQVEAIVAPITDELQLELVDIAFEKEGPNWFLRIFIDKDGGVDIDECAAVSEKVSEKMDENDPITQNYFLEVSSPGAERPLKKEQDFENAVSKYVHVTSYEPIDGRKMWEGTLVSYDGTTLVITITDKTRKITCEIPKDKVAKARLAIQF
2E70 Chain:A ((704-752))
---------------------------------------------------------------------------------------------ELIGQTVRISQG-P---YKGYIGVVKDATESTARVELHST--CQTISVDRQRLTT-------
General information:
TITO was launched using:
RESULT:
Template:
2E70.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24689 for 315 contacts (-78.4/contact) +
2D Compatibility (PS) -5596 + (NN) -4021 + (LL) 7908
1D Compatibility (HY) -800 + (ID) 300
Total energy: -27498.0 ( -87.30 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_2E70.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E70-query.scw
PDB file :
Tito_Scwrl_2E70.pdb
: