Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGIIPLWKERGMTSHDCVYKLRKILHTKKVGHTGTLDPEVEGVLPICIGRATKLAEYVTDEGKVYVAEITLGKSTTTEDATGETVNTKELAEISAAELQAALTKLTGKITQIPPMFSAVKVNGKKLYEYARAGIEVERPSRQVDIYSLIRLDGDTALNQSNPTFQLEIACGKGTYIRTLAVMIGELLGYPAHMSKLERTRSGFFKKEDCLTLTEIDEMMQ-------ASD-SSFLYPLEKGIESMAKLVIEEEVYAKVLNGGLLPTSLFAEV-----ENEPRAALIFKDKLTAIYKPHPEKKDLWKPEKVIELNQA |
| 2APO Chain:A ((65-322)) | KYGVVVVDKPRGPTSHEVSTWVKKILNLDKAGHGGTLDPKVTGVLPVALERATKTIPMWHIPPKEYVCLMHLHR------------------DASEEDILRVFKEFTGRIYQR----------------------------RIRKIHELELLDKDG------KDVLFRVKCQSGTYIRKLCEDIGEALGTSAHMQELRRTKSGCFEEKDAVYLQDLLDAYVFWKEDGDEEELRRVIKPMEYGLRHLKKVVVKDSAVDAICHGADVYVRGIAKLSKGIGKGETVLVETLKGEAVAVGKAL------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2APO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166703 for 1834 contacts (-90.9/contact) +
2D Compatibility (PS) -24930 + (NN) -7104 + (LL) 4256
1D Compatibility (HY) -12400 + (ID) 3800
Total energy: -210681.0 ( -114.88 by residue)
QMean score : 0.537
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