Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALTQERKNEIIAEYRVHDTDTGSPEVQIAVLTAEINSLNEHVRVHKKDHHSYRGLMKMVGHRRNLLTYLRKKDVQRYRELIKRLGLRR
1KUQ Chain:A ((4-87))
---CKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHHSHRGLLMMVGQRRRLLRYLQREDPERYRALIEKLGI--
General information:
TITO was launched using:
RESULT:
Template:
1KUQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19200 for 508 contacts (-37.8/contact) +
2D Compatibility (PS) -9035 + (NN) -4591 + (LL) 728
1D Compatibility (HY) -8400 + (ID) 2350
Total energy: -42848.0 ( -84.35 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_1KUQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KUQ-query.scw
PDB file :
Tito_Scwrl_1KUQ.pdb
: