Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------------MKKSNTFLLITILVGLVFISFGCSEEKETPKKTAKEVQGVQIKTKEFQRVVGWLSKDSVLLQTKKSGVTYFEELNIYNEKKRPIFNTKESISEVQISPDYRNILLYSAESAEKATMRIIALNDGSTVASRATKPLTTTFYWNDESPEKIMFVTYSPEWNFQIENWDYT----LDQLDKIDVASPFISWYGD-NLVISNNKDKPDDELGNLYLQDIRDSATKNLIVANIMQFAVHDNVLLTIEKNSDEKLLYDFR--TLGFQNFFSYNAAREYDELGTFVPYFDTNFDKNTFLTFVPYKSAKIGSGAKEYKLVKIDPTNKKESTILELMDNQPILSYETGDLVLYGYLFDKVIDTKTGKMYNLINTPTKSF
1R5M Chain:A ((34-425))GFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETYWKLTIIAELRHPFALSTNQVTCLAWSHDGNSIVTGVENGELRLWN---KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVEN----VTILWNVISGTVMQHF--ELKGSLGVDVEWVDDDKFVIPGP---KGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDD------GTLRIWHGGNGNSQNCFYG-------HSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSPLPIP--LYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEG-----SVVAIPG------


General information:
TITO was launched using:
RESULT:

Template: 1R5M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68898 for 2661 contacts (-25.9/contact) +
2D Compatibility (PS) -34665 + (NN) -8483 + (LL) 1908
1D Compatibility (HY) -800 + (ID) 1550
Total energy: -112488.0 ( -42.27 by residue)
QMean score : 0.226

(partial model without unconserved sides chains):
PDB file : Tito_1R5M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1R5M-query.scw
PDB file : Tito_Scwrl_1R5M.pdb: