Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------MKKSNTFLLITILVGLVFISFGCSEEKETPKKTAKEVQGVQIKTKEFQRVVGWLSKDSVLLQTKKSGVTYFEELNIYNEKKRPIFNTKESISEVQISPDYRNILLYSAESAEKATMRIIALNDGSTVASRATKPLTTTFYWNDESPEKIMFVTYSPEWNFQIENWDYT----LDQLDKIDVASPFISWYGD-NLVISNNKDKPDDELGNLYLQDIRDSATKNLIVANIMQFAVHDNVLLTIEKNSDEKLLYDFR--TLGFQNFFSYNAAREYDELGTFVPYFDTNFDKNTFLTFVPYKSAKIGSGAKEYKLVKIDPTNKKESTILELMDNQPILSYETGDLVLYGYLFDKVIDTKTGKMYNLINTPTKSF |
1R5M Chain:A ((34-425)) | GFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETYWKLTIIAELRHPFALSTNQVTCLAWSHDGNSIVTGVENGELRLWN---KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVEN----VTILWNVISGTVMQHF--ELKGSLGVDVEWVDDDKFVIPGP---KGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDD------GTLRIWHGGNGNSQNCFYG-------HSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSPLPIP--LYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEG-----SVVAIPG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R5M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68898 for 2661 contacts (-25.9/contact) +
2D Compatibility (PS) -34665 + (NN) -8483 + (LL) 1908
1D Compatibility (HY) -800 + (ID) 1550
Total energy: -112488.0 ( -42.27 by residue)
QMean score : 0.226
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