Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSKQNVPSYGGQAVVEGVMFGGRKQTVTAIRRIDGSLEYFYLEKNSPVWVMRMKKIPFLRGIVALIESSAIGSKHLAFATDRYDEDPNNPVEEEKIEKKESKVAMWLGVAVIGILSFVFAKFVMTLIPVFLAELFRPIVPGDTAQVFLESLFKLILLLTYIFAVSQTPIIKRVFQYHGSEHKVINCYEENLPLTVENVQKQSRLHYRCGSSFILFTVIVGMFIYLLVPTDPLWLRVVD-----RILLIPVVLGVAFEVLQLTNKCRNIPVLKYLGVPGLWLQLLTTKEPSDDQVEVAIASFNELLR--VEKEGAPIDVVEPDNLELLE |
| 3VH8 Chain:G ((24-309)) | --KPFLSAWPSAVVPRG-------GHVTLRCHYRHRFNNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNP------------VVIMVTGNHRK----------PSLLAHPGPLVKSGERVILQCWSDIMFEHFFLHKEGISKDPSRLVGQIHDG---------VSKANFSIGPMMLALAGTYRCYGSV------THTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSRSSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGGTYRCFGSFRHSPYEWSDPSDPLLV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128549 for 2048 contacts (-62.8/contact) +
2D Compatibility (PS) -28730 + (NN) -1379 + (LL) 5048
1D Compatibility (HY) 8800 + (ID) 2100
Total energy: -146910.0 ( -71.73 by residue)
QMean score : 0.146
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