Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDKIFQEKVGPVALTIVPTQKYKSNKIVFKFRAPLER---ETVTKRALLSILLETNSEKYPTQTDFRKQLANLYGANFYTTTAKKGNEHVLTVIFDMIDGQYVSDGNHILEDAFAFMEQALFRPNVANDAFNEETLTREKENLKSSLEGIYDDKIRFASKRLVEEMFRDDEFRFGSAGVLEDIDAITAKDLYEYYLQFIAEDTIEIFICGDVTKEEVMPLI-EKMAFSPRPERKGI-FYTKEAPKEVR---VIHEQQAINQGKLVLGYQTETLFGDDDFVALQLANGLLGGF-----------ANSKIFINVREKASLAYYASSRIDS--FKGYMIISAGIDEVNYEQALKIIEEQVVAM-K--QGNFTDDELNQTKEMLINQLLETNDQAQGLIELVYNNVLR-DANLDLENWIAKIKQATKEEVVAAINKIKP----------D-TIYFLSKGGEELHGKNHI |
| 1HR6 Chain:A ((7-439)) | ----KLSSLANGLKVATSNTPG-HFSALGLYIDAGSRFEGRNLKGCTHILDRLAFKSTEHVE-GRAMAETLELL-GGNYQCTSSR----ENLMYQASVFNQ--------DVGKMLQLMSETVRFP-----KITEQELQEQKLSAEYEIDEVWMKPELVLPELLHTAAYSGETLGSPLICPRGLIPSISKYYLLDYRNKFYTPENTVAAFVG-VPHEKALELTGKYLGDWQSTHPPITKKVAQYTGGESCIPPAPVFGNLPELFHIQIGFEGLP-IDHPDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTHVLNQYYFVENCVAFNHSYSDSGIFGISLSCIPQAAPQAVEVIAQQMYNTFANKDLRLTEDEVSRAKNQLKSSLLMNLESKLVELEDMGRQVLMHGRKIPVNEMISKIEDLKPDDISRVAEMIFTGNVNNAGNGKGRATVVMQGDRGS------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1HR6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -155693 for 3197 contacts (-48.7/contact) +
2D Compatibility (PS) -43325 + (NN) -20014 + (LL) 972
1D Compatibility (HY) -12400 + (ID) 2950
Total energy: -233410.0 ( -73.01 by residue)
QMean score : 0.513
|
|
|