Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKILFIGDVVGS--------IGRDAITEYLPQLKKK----YKPTITVINGENAASGRG----ITEKIYKDFLELGANAVTLGNHTWDNRD--IFEFIDEAKYLVRPANFPDD--T-TPGTGMVFVKSNQHEIAVINMQGRTFLA--------D--LDDPFRKMDYLIEEAK--KRTNIIFVDFHAETTSE---------KEAMGWYLD--GRVTAVVGTHTHVQTSDNR---------------ILPEGTAYLTDTGMTGPYDAILGMEKEAVIRRFKTALPTRFEVPKTGRAVLSGCLITLDESTGKAQKIDRILINEDHPFSFD |
| 1HP1 Chain:A ((9-280)) | ITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGS-LAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADFEFRNG----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102936 for 1873 contacts (-55.0/contact) +
2D Compatibility (PS) -23388 + (NN) -9367 + (LL) 3488
1D Compatibility (HY) -4800 + (ID) 1950
Total energy: -138953.0 ( -74.19 by residue)
QMean score : 0.476
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