Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKYVVIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDAFETEIKKLMDSGVRGFNITTPFKERILPFLDELDNLAAASGAVNTVLKKEDKWYGFNTDGKGYLEGLEEIRSITEDDSILITGAGGASKAIYLALSTHTDAKITVANRTTEKAIEMTKDNNNHHAITLEEAEKQLADFTIIIQTTSIGLEASKNKSPISLANVKQGTICSDIIYNPAETAFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQLGGN |
| 2D5C Chain:B ((3-262)) | --RFAVLGHPVAHSLSPAMHAFALESLGLEGSYEAWDTPLEALPGRLKEVRRA-FRGVNLTLPLKEAALAHLDWVSPEAQRIGAVNTVLQVEGRLFGFNTDAPGFLEALKA-GGIPLKGPALVLGAGGAGRAVAFALR-EAGLEVWVWNRTPQRALALAEEFG-LRAVPLEKAREA----RLLVNATRVGL-----ASPLPAELFPEEGAAVDLVYRPLWTRFLREAKAKGLKVQTGLPMLAWQGALAFRLWTGLLPDPSGMEEAARRALG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89971 for 2325 contacts (-38.7/contact) +
2D Compatibility (PS) -28327 + (NN) -15799 + (LL) 612
1D Compatibility (HY) -18400 + (ID) 4900
Total energy: -156785.0 ( -67.43 by residue)
QMean score : 0.512
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