Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENRIYLDHAATSPIHPEVIQTMLGAITNTYGNPSSIHYAGREARKALDEARHTIAKSIHATEKEIIFTSGGTEGDNLALIGTALAHKENGT---HIITSQIEHHAVLKTCEYL-ETQGFEVTYLPVDE-HGIVSVESVQAALRPETILVSIMYGNNEIGSIQPIAEIGALLRD----------QQAIFHTDAVQAYGLLNINVMELGVDLLTTSSHKINGPRGVGFLYVKNGTRLA--YQM-HGGEQERKRRAGTENLAGICGFSAASSIM-----TNERELKN-EEYISFKKRMAEIWRSAELDFEVNGLEADTLPHVFSVRFPGVSIEQLLMNLDMEGIAVSSGSACTAGTVD-PSHVLVALFGENHPAIQETVRISFGLGNHLEEVEMAATKISEVVTRLMKI |
| 3A9Y Chain:B ((19-428)) | ---KVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQ-TRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPR-IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLE-ERLEAEFGKRIHLNSRFPGVE--RLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSC-GIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155839 for 3344 contacts (-46.6/contact) +
2D Compatibility (PS) -40570 + (NN) -17777 + (LL) 920
1D Compatibility (HY) -25600 + (ID) 7050
Total energy: -245916.0 ( -73.54 by residue)
QMean score : 0.514
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