Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIPAKLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNSNQLLPYLDYDLISENPKILCGFSDITALATAIYTQTELITYSG-AHFSSFSMEKGL-DYVMESFSDCLLQKEP----FALKESATWSDDEWYLDQENRNFIPNE----GLVVMQPGVAEGIIIGGNLCTLNLLQGTEYMPNLA-GTILFIEDDFMTIPETFDRDLESLLSQPGADEIEGMVIGRFQQKTAMTAEKLAYIIETKTALQK-IPVISGADFGHTQPIATFPIGGTARIDTNQTDKIQIIRH |
| 3TLZ Chain:B ((35-354)) | LLAAPLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNSNSLLPFLDYDAIIANPKIIIGYSDTTALLAGIYAKTGLITFYGPALIPSFGEHPPLVDITYESFIKILTRKQSGIYTYTLPEK--WSDESINFN-ENKILRPKKLYKNNCAFYGSGKVEGRVIGGNLNTLTGIWGSEWMPEIRNGDILFIEDSRKSI-ATVERLFSMLKLNRVFDKVSAIILGKHELFDCAGSKRRPYEVLTEVLDGKQIPVLDGFDCSHTHPMLTLPLGVKLAID------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TLZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189497 for 2660 contacts (-71.2/contact) +
2D Compatibility (PS) -32395 + (NN) -8055 + (LL) 1184
1D Compatibility (HY) -21200 + (ID) 5600
Total energy: -255563.0 ( -96.08 by residue)
QMean score : 0.487
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