Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGEKMAIWRTKKPATKQKIVSDLQELGIKKGDTIIFHASMSKAHWICGGPVTVILALQELVGELGNIVMPAQTGQLSDPAKWENPPVPESWWKIIRRETPPFDPLVTPTRGMGVIAETFRTMPDVERSFHPYHSFCAWGKDKKQILANQPLAKSMGDESPLGKMYQLDAKIILFGVDNNNNTSLHLAEERSNAFPLIENQAAFLKNGEIIWEKYQEIDYNSEVFIALGRAYEKEHDFHPTTIIGAPTKIYDMRDLVDFGTKYFQTKNH |
| 3IJW Chain:A ((7-267)) | -----IVASTQLPNTIKTITNDLRKLGLKKGMTVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTIIMPTQSSDLSDPKHWSRPPVPEEWWQIIRDNVPAFEPHITPTRAMGKVVECFRTYPNVVRSNHPLGSFAAWGRHAEEITVNQSLSMSLGEESPLRKIYDLDGYILLIGVGYDSNTSVHLSEVRSGACELIKVGAPIIENGERVWKEFVDMDYDSDKFVEIGVEFEQKGTVTMGKIGNAKCRLMKQRDIVDFGTEWFRKK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99369 for 2221 contacts (-44.7/contact) +
2D Compatibility (PS) -27786 + (NN) -5892 + (LL) 376
1D Compatibility (HY) -24000 + (ID) 6050
Total energy: -162721.0 ( -73.26 by residue)
QMean score : 0.499
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