Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNLLVVGSGGREHAISKKLLASNNVEKVFC-APGNDGMR-LDDIQLVAISETDKAGLIDFAKKAEIAFVIVGPEVPLLEGVVDALEEAGIKAFGPKANAALIEGSKDFAKQFMEKYAIPTAASRTFTDYAEAKAYLNERGVPIVIKADGLAAGKGVTVALEMEEAVLALKDMMLEEKFGDASLKVVIEDFLAGEEFSLMAFVNGEEVYPMSIAQDHKRAYEGDKGPNTGGMGAYS-PVPHISEAVIEEAVQKILLPTAKGMVKEGRYFRGILYAGLILTADGPKVIEFNARFGDPETQVVLPRLESDFAALIDALLHNEKPDV--RFKKTGLTLGVVLASAGYPEHYEKGNKLTGLNDI--AEDVAIYHAGTKQDENGDFISDGGRVLLLAKEAETMSDARTLLYPEMQKLDNPNFFYRIDIGTKAE |
3LP8 Chain:A ((22-440)) | MNVLVIGSGGREHSMLHHIRKST-LLNKLFIAPGREGMSGLADI--IDIDINSTIEVIQVCKKEKIELVVIGPETPLMNGLSDALTEEGILVFGPSKAAARLESSKGFTKELCMRYGIPTAKYGYFVDTNSAYKFIDKHKLPLVVKADGLAQGKGTVICHTHEEAYNAVDAMLVHHKFGEAGCAIIIEEFLEGKEISFFTLVDGSNPVILGVAQDYKTIGDNNKGPNTGGMGSYSKPNII-TQEMEHIIIQKIIYPTIKAMFNMNIQFRGLLFAGIIIKKNEPKLLEYNVRFGDPETQSILPRLNSDFLKLLSLTAKGKLGNESVELSKK-AALCVVVASRGYPGEYKKNSIINGIENIEKLPNVQLLHAGTRR-EGNNWVSDSGRVINVVAQGENLASAKHQAYAALDLLDWPDGIYRYDIGSC-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -202402 for 3706 contacts (-54.6/contact) +
2D Compatibility (PS) -46036 + (NN) -26336 + (LL) 420
1D Compatibility (HY) -36800 + (ID) 8500
Total energy: -319654.0 ( -86.25 by residue)
QMean score : 0.496
|
|
|