Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQEEIIIAAQKWMQSHFEKETTGHDWEHIKRVWHLSKQIQVTEGGDKFAIELAALFHDYNDSKLTEDP-------------LQ------ATEIITTWLRE-KEIPEDVISKIIRIIQAVSFKNGKNPIQASTIEEKIVQDADRLDAIGAIGIARTFTYGGAHNREIANRDHPENTTLQHFYDKLLLIQTQLKTKTGRELAGEKQIIMQDFIHALEKELKI |
2O08 Chain:A ((5-134)) | -------GKALQLVKPHL----TEHRYQHTIGVMETAIDLAKLYGADQQKAELAAIFHDYAKFRDKNEMRTLIREKLSQQDILFYGDELLHAPCGAYYVREEVGIED---EDVLQAIRFHTTGR-----PNMSLLEKIIFLADYIEPNR------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O08.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18036 for 841 contacts (-21.4/contact) +
2D Compatibility (PS) -11760 + (NN) -3228 + (LL) 7300
1D Compatibility (HY) -4400 + (ID) 1300
Total energy: -31424.0 ( -37.37 by residue)
QMean score : 0.489
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