Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTFFKKLKDKITQQTDSVSGKFKDGLSKTRGNFSGKINEMVARYRKVDEDFFEELEEILIGADVGFETVMELVDTLRREVQLRNISDPKDVQEVIVEKLVEIYQGDEKE---------DEALHIEEDGLTVILFVGVNGVGKTTSIGKMAHRFKQEGKKVMLAAGDTFRAGAIDQLEVWGERTGVDVIKQAEGSDPAAVMFDAVQAAKARKADILLCDTAGRLQNKVNLMNELEKVKRVITREIPNAPHEVLLVLDATTGQNAFVQAKQFKETTDVTGIILTKLDGTAKGGIVIAIRNELDIPVKFVGLGEQMDDLQAFDANEYVYGLFADMVDNEK
1RJ9 Chain:A ((43-303))--------------------------------------------------------------DVGLSATEEILQEVR-------ASGRKDLKEAVKEKLVGMLEPDERRATLRKLGFNPQKPKPVEPKGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDSAALAYDAVQAMKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAKKFHEAVGLTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALLE-------


General information:
TITO was launched using:
RESULT:

Template: 1RJ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136891 for 2140 contacts (-64.0/contact) +
2D Compatibility (PS) -27920 + (NN) -18646 + (LL) 5168
1D Compatibility (HY) -21600 + (ID) 6500
Total energy: -206389.0 ( -96.44 by residue)
QMean score : 0.592

(partial model without unconserved sides chains):
PDB file : Tito_1RJ9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RJ9-query.scw
PDB file : Tito_Scwrl_1RJ9.pdb: