Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRLAVEIPGLSLKNPIMPASGCFGFGQEYSKYYDLNELGAIMAKAVTPEPRLGNPTPRVAETASGMLNAIGLQNPGLEHVLAHELPFLEQF--ETPIIANVAGATEDDYVQVCARIGESKAVKAIELNISCPNVKHGGIAFGTDPEVAHRLTKAVKNVASVPVYVKLSPNVADIVSIAQAIEAAGADGLTMINTL----LGMRIDLKTRKPII--ANGTGGLSGPAIKPVAIRMIH--QVRAVSNIPIIGMGGVQTVDDVLEFLIAGADAVAVGT-MNFTDPFICPKLISELPKRMDALGISSLQDLKKERTNQ |
| 1JQX Chain:B ((13-304)) | --------------NPFMNASGVHCMTIEDLEELKASQAGAYITKSSTLEKREGNPLPAYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVP-GKPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYF-DLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRIIKELEEIMNQKGYQSIADF------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JQX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161758 for 2323 contacts (-69.6/contact) +
2D Compatibility (PS) -30016 + (NN) -13249 + (LL) 1736
1D Compatibility (HY) -14400 + (ID) 4700
Total energy: -222387.0 ( -95.73 by residue)
QMean score : 0.509
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