Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VLQTEMKVIQQTEIADKVYELILTGECV---AGMSPGQFLMLKPSRSDLLMRRPISICSYDKTAKTCILLYRVE--GDG-T-RDFSKLSEGDTIDVLGPLGKGFDIDTTPAPKTALLIGGGIGVPPMYQLGKELAEK-GVQVMFVNGFQSAKDSFYAQEMAEYG---TVHIATVDGSLGTQGFVTD--ITKNFPEEPDVIYSCGPKAMLQAVKASFPET-KTYLS--------------------------------------------LEERMACGIGACYACVCPKADDTNKQFKVCEDGPVFRADEVKL |
2PIA Chain:A ((8-287)) | --FLRLKIASKEKIARDIWSFELTDPQGAPLPPFEAGANLTVAVP---NGSRRTYSLCNDSQERNRYVIAVKRDSNGRGGSISFIDDTSEGDAVEVSLPRNE-FPLDKR--AKSFILVAGGIGITPMLSMARQLRAEGLRSFRLYYLTRDPEGTAFFDELTSDEWRSDVKIHHDHGD--PTKAFDFWSVFEK-SKPAQHVYCCGPQALMDTVRDMTGHWPSGTVHFESFGATNTNARENTPFTVRLSRSGTSFEIPANRSILEVLRDANVRVPSSCESGTCGSCKTALCSG--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PIA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120386 for 1631 contacts (-73.8/contact) +
2D Compatibility (PS) -24377 + (NN) -10492 + (LL) 1676
1D Compatibility (HY) -8400 + (ID) 2200
Total energy: -164179.0 ( -100.66 by residue)
QMean score : 0.477
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