Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGIMNSLLKQKEMVVKDWLTYYVSVDDPYIFTLKNDHRLMDETGFVLENLFIGMTEDLGKMNAFARELGKAQFITSLGISRILFHIRLLEEFLLDYASEIKTKSANYRELYLFSIKLHQVFSSFTQNLIEGYTHANEQMIVQKENQIIKESTKLIWIAENVFLLPLIGKITDERAKQITETALFEVCEQPVNYLIIDLSGVQLESPNIGKYIEYFFSSLKLVGVTPIITGMQPQTAKVMVQANL-TEQHGI-KTFATLRQATKTLMKEKEARNAHK |
| 2VY9 Chain:A ((6-119)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------PILKVDDYWVVAIEETLHDQSVIQFKEELLHNITGVAGKGLVIDISALEVVDSFVTRVLIEISRLAELLGLPFVLTGIKPAVAITLT---EMGLDLRGMATALNLQKGLDKLKNLAR------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66932 for 760 contacts (-88.1/contact) +
2D Compatibility (PS) -11898 + (NN) -2388 + (LL) 13748
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -73070.0 ( -96.14 by residue)
QMean score : 0.547
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