Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------MKQLKVENL--------TKTYGEKSLFENISLTITEGERIGLIGVNGTGKSTLLQIISGSESGDKGTVTKAKDYTIGYLAQDPAFNEEDTVLAAVFDGDTAALRAMRKYEEVLLAMSLDAENTKLHDAYTAASQEMDASAAWDMNTEAKTILERLGITDLTAK-ISALSGGQRKRVGLAQVLIETPDLLILDEPTNHLDFQSIRWLEEYLNRFKG---AVLLVTHDRYFLDRVTNHMVEL-DRGSAYRYVGNYEKFMESKAIRMENEVRESEKNKNLYRKELAWMRRGPQGRATKQNARQDRFHDLEKKVKIKTDDSELAIDFVTSRLGKDVFELKNLEKRFDEKQVLQDFSLIIQPGERLGITGNNGTGKSTLLNMLAGKLAPDAGEVVTGQTVQIGYYTQQNEEMDPDMRMIAYLQEAGEQVTTSGGEVISVSAMLERFLFPPNSHGKKIGSLSGGEKRRLFLLRILMERPNVLLLDEPTNDLDTQ----TLTVLEDYLESFNGTVITVSHDRYFLDKVVNKLLVFRAIGEVEIFYGEYSDYLKELEAKGKPAKSMKKMANTSVEKSSPEKKEKVKLTYQEQLEWDGIEDAISKLEKDIESLNETLEQTGADFTKAAEISGFITAKETELEQMMERWEFLSQYAE |
| 3J16 Chain:B ((1-608)) | MSDKNSRIAIVSADKCKPKKCRQECKRSCPVVKTGKLCIEVTPTSKIAFISEILCIGCGICVKKCPFDAIQIINLPTNLEAHVTHRYSANSFKLHRLPTPRPGQVLGLVGTNGIGKSTALKILAGKQKPNLGRFDDPPE--WQEIIKYFRGSELQNYFTKMLEDDIKA---------IIKPQYVDNIPRAIKGPVQKVGELLKLRM-EKSPEDVKRYIKILQLENVLKRDIEKLSGGELQRFAIGMSCVQEADVYMFDEPSSYLDVKQRLNAAQIIRSLLAPTKYVICVEHDLSVLDYLSDFVCIIYGVPSVYGVVTLPASVREGINIFLDGHIPAEN---------------------LRFRTEALQFRIADATEDLQNDSASRAFSYPSLKKTQGDFVLNVEEGEF-------------SDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLN-----VSMKPQKIAPKFP--GTVRQLFFKKIRGQFLNPQFQTDVVKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVIVF----------------------EGIPSKNAHARAPESLLTGCNRFLKNLNVTFR----------------RDPNSFRPRINKLDSQMDKEQKSSG--------------NYFFLDNTGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9925 for 4277 contacts (-2.3/contact) +
2D Compatibility (PS) -55975 + (NN) -14313 + (LL) 9776
1D Compatibility (HY) -28400 + (ID) 5450
Total energy: -104287.0 ( -24.38 by residue)
QMean score : 0.283
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