Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTPSMEDYIEKIYSLIETKGYARVSDIADELFVHPSSVTKMVQKLDKDEYLIYEKYRGLILTPKGTQMGKRLLERHALLESFLSIIGVDPSHIYHDVEGIEHHLSWNSIDRIGDVVQFFENHPDALKTLKAMETTKPETKE
3R60 Chain:B ((3-133))
---PSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIYE---GLVLTSKGKKIGKRLVYRHELLEQFLRIIGVDEEKIYNDVEGIEHHLSWNSIDRIGDLVQYFEEDDARKKDLKSIQ--------
General information:
TITO was launched using:
RESULT:
Template:
3R60.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75976 for 861 contacts (-88.2/contact) +
2D Compatibility (PS) -13051 + (NN) 2924 + (LL) 728
1D Compatibility (HY) -18000 + (ID) 4800
Total energy: -108175.0 ( -125.64 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_3R60.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R60-query.scw
PDB file :
Tito_Scwrl_3R60.pdb
: