Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKWKKSLAGLSSYKPGKREEEVMAELGLTKITKLSSNENPLGTSPKVAALQANSNVETEIYPDGWASSLRKEVTNFYQLEEEELIFTAGVDELIELLTRVLLDTTKNTVMATPTFVQYRQNALIEGAEVREIPLLTDGAHDLEGMLNAID--EKTTIVWICNPNNPTGNYIDLADIQAFLDKVPS-DILVVLDEAYIEYVTPQPKK-HEKL-IRTYKNLIITRTFSKIYGLASARVGYGIADKEIINQLNIVRPPFNTTSIGQKLAIEAIKDQAFIEACRISNANGIKQYEAFAKRFEQVKLYPANGNFVLIDLGIEARTIFSYLEKNGYITRSGAALG-FPTAVRITIGKEEENSAVIALLEKLL
3LY1 Chain:A ((14-349))--------------------------STDNPIRINFNENPLGMSPKAQAAARDAVVKANRYAKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIAS-KPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYVAGEKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL-KLPYLPSEGNFVFHQLVVPLKDYQTHMADAGVLIGRA--FPPADNWCRISLGTPQEMQWVADTMREFR


General information:
TITO was launched using:
RESULT:

Template: 3LY1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154320 for 2811 contacts (-54.9/contact) +
2D Compatibility (PS) -37123 + (NN) -23974 + (LL) 2524
1D Compatibility (HY) -15200 + (ID) 4100
Total energy: -232193.0 ( -82.60 by residue)
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_3LY1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LY1-query.scw
PDB file : Tito_Scwrl_3LY1.pdb: