Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKWKKSLAGLSSYKPGKREEEVMAELGLTKITKLSSNENPLGTSPKVAALQANSNVETEIYPDGWASSLRKEVTNFYQLEEEELIFTAGVDELIELLTRVLLDTTKNTVMATPTFVQYRQNALIEGAEVREIPLLTDGAHDLEGMLNAID--EKTTIVWICNPNNPTGNYIDLADIQAFLDKVPS-DILVVLDEAYIEYVTPQPKK-HEKL-IRTYKNLIITRTFSKIYGLASARVGYGIADKEIINQLNIVRPPFNTTSIGQKLAIEAIKDQAFIEACRISNANGIKQYEAFAKRFEQVKLYPANGNFVLIDLGIEARTIFSYLEKNGYITRSGAALG-FPTAVRITIGKEEENSAVIALLEKLL |
3LY1 Chain:A ((14-349)) | --------------------------STDNPIRINFNENPLGMSPKAQAAARDAVVKANRYAKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIAS-KPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYVAGEKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL-KLPYLPSEGNFVFHQLVVPLKDYQTHMADAGVLIGRA--FPPADNWCRISLGTPQEMQWVADTMREFR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LY1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154320 for 2811 contacts (-54.9/contact) +
2D Compatibility (PS) -37123 + (NN) -23974 + (LL) 2524
1D Compatibility (HY) -15200 + (ID) 4100
Total energy: -232193.0 ( -82.60 by residue)
QMean score : 0.509
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