Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKEWKKITAIVLLIIIIAGFFIPVPYYISKPGGTEELAPLVTVDNHPNKKDGSLSLVTIAMGKANIYTYMTAKFLPYHELEKDSEIKYENESDEEYNVRQMQMMNESKNNAIQVAYKAAGQEVKVTYDGVYVLSVKDDVPAADVLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDKNEQADIKLTAIDK-KGTPGIGITLVDDEKITADPTVKIDSEKIGGPSAGLMFSLEIYSRFQKNDLTDGKKIAGTGTIDPDGTVGRIGGIDQKVVAADKSGAKIFFAPNDPITEEMKKSDPSIESNYDTAVKTAKDIDTNMKIVPVKTFQDAVDYLKKLQ |
| 2HGA Chain:A ((23-107)) | ------------------------------------------------------------------------------------------------------------------------------QPDGVQIDSVVPGSPASKVLTPGLVIESINGMPTSNLTTYSAALKTISVGEVINITTDQGTF----HLKTGRNPNNSSRAYMGIRTSNH------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40583 for 578 contacts (-70.2/contact) +
2D Compatibility (PS) -8961 + (NN) -1935 + (LL) 16500
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -37579.0 ( -65.02 by residue)
QMean score : 0.592
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