Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVIAGERKGHALKAVP-GNNTRPTTDKVKESLFSIIGPFFDGDMVLDLFAGSGGLGIEALSR-GAERAVFIDQAALAIKTIRQNLEGCHFTERAEVYRNDAERALKLLHKNEWKFDLIFLDPPYKKQQL-----------------------EKLIGTLE-KLELVNENGRIICEHDKEAIMPDTIGKFEKIKSVSYGITVLSIFEFQEA
2B3T Chain:A ((76-243))
------EFWSLPLFVSPATLIPRPDTECLVEQALARLPE--QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALA-----GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQG-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2B3T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44491 for 1104 contacts (-40.3/contact) +
2D Compatibility (PS) -15024 + (NN) -3100 + (LL) 3724
1D Compatibility (HY) -5200 + (ID) 1450
Total energy: -65541.0 ( -59.37 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_2B3T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B3T-query.scw
PDB file :
Tito_Scwrl_2B3T.pdb
: