Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIIGIAACTSGIAHTYIAKEKLTKAGLALGHNVHIETQGTIGIEDELSAEQVKNADVVIIAADIKISGKDRFKGKRVVEIPTDLAIKAPKQIINKIDKEINN
2M1Z Chain:A ((3-104))
RKIIAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVDTKVRNKERFDGKVVLEVPVSAPIKDAEKVINAALALID-
General information:
TITO was launched using:
RESULT:
Template:
2M1Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56211 for 844 contacts (-66.6/contact) +
2D Compatibility (PS) -11125 + (NN) -3914 + (LL) -80
1D Compatibility (HY) -8400 + (ID) 2100
Total energy: -81830.0 ( -96.95 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_2M1Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M1Z-query.scw
PDB file :
Tito_Scwrl_2M1Z.pdb
: