Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKIKSFLGKSLTLVVLGVFLFSGWKIGMELYENKHNQTILDDAKAVYTKDAATTNVNGEVRDELRDLQKLNKDMVGWLTIIDTEIDYPILQSKDNDYYLHHNYKNEKARAGSIFKDYRNTNEFLDKNTIIYGHNMK-DGSMFADLRKYLDKDFLVAHPTFSYESGLTNYEVEIFAVYETTTDFYYIETEFPETTDFEDYLQKVKQQSVYTSNVKVSGKDRIITLSTCDTEKDYEKGRMVIQGKLVTK |
2KW8 Chain:A ((70-205)) | ----------------------------------------------------------------ANASLDKKQVIGRISIPSVSLELPVLKSSTEKN-LL---------SGAATVKENQVM--GKGNYALAGHNMSKKGVLFSDIASLKKG------DKIYLYDNENEYEYAVTGVSEVTPDKWE----------------------VV-----EDHGKDEITLITCVSVKD-NSKRYVVAGDLVG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41068 for 996 contacts (-41.2/contact) +
2D Compatibility (PS) -14345 + (NN) -2633 + (LL) 8120
1D Compatibility (HY) -5200 + (ID) 1750
Total energy: -56876.0 ( -57.10 by residue)
QMean score : 0.474
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