Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTINTKSQLPIYEQIVQKIKEQVVKGVLQEGEKILSIREFASRIGVNPNTVSKAYQELERQEVIITVKGKGTFIANQTDKLSSPKKLAETRTKLKETILDLVYLGVNIEEIHKLADEYSQDIIGGDVVEG
4U0Y Chain:D ((5-78))
--NINKQSPIPIYYQIMEQLKTQIKNGELQPDMPLPSEREYAEQFGISRMTVRQALSNLVNEGLLYRLKGRGTFVS-------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4U0Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43215 for 484 contacts (-89.3/contact) +
2D Compatibility (PS) -7629 + (NN) 1931 + (LL) 3980
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -53483.0 ( -110.50 by residue)
QMean score : 0.757
(partial model without unconserved sides chains):
PDB file :
Tito_4U0Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U0Y-query.scw
PDB file :
Tito_Scwrl_4U0Y.pdb
: