Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGQLFNLPQVEDINYIQTVRAVRKFFKDYLMLRVMAGSRKLPTMTTTYKLTPPNFSNEFHSKVEDAAIHNVDNVHAAQEAVKKYDAILNQLEHIHRKILFEKFIHNLQDITIMLDIPYEERQYKREKRKAVIELATTLGIEVLN
1RP3 Chain:A ((174-233))
-------------------------------------------------------------------------------LTEKVKEAVSKLPEREKLVIQLIFYEELPAKEVAKILETSVSRVSQLKAKALERLREMLS-----
General information:
TITO was launched using:
RESULT:
Template:
1RP3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5804 for 374 contacts (-15.5/contact) +
2D Compatibility (PS) -6450 + (NN) -3691 + (LL) 6528
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -11867.0 ( -31.73 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_1RP3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RP3-query.scw
PDB file :
Tito_Scwrl_1RP3.pdb
: