Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRKETIQFGAIIHGVGGTTDGWRHPDINPAASTDLDFYKTRAKIAEQGLFSFVFIADGLFISEKSIPHFLNRFEPITILSALAESTENIGLVGTFS-TSFTEPFTLARQLSSLDHISSGRAGWNLVTSPQEGAARNHSKKNLPTHSDRYTIAAEHLKVVRGLWNSWEEDAFTYNKETGEFFNPEKLHHLNHQGEYFQVEGPLNIGRSKQ-GEPVVFQAGASSTGRDFAAQNAEAIFTHS-DSLEEAVEFYRDVKSRAEKAGRNADEVRIFPGISPIVADTLEEAEAKYTEFASLIPIENAVTYLARYFDDYDLSQFDLDAPFPDLGDIGKNAFQSTTDRIKKEAKERHLTLRQVATEAATPKTPFIGTKEQVADLIEVWFQNEAADGFII-ASD------IPGTFETFVEQVIPLLQSRGLYRNEYPATTLRGNLGLTIPQNKQAVETK |
| 1LUC Chain:B ((1-320)) | ------MKFGLFFLNFMN-------SK--RSSDQVIEEMLDTAHYVDQLKFDTLAVYENHFSNNG------VVGAPLTVAGFLLGMTKNAKVASLNHVITTHHPVRVAEEACLLDQMSEGRFAFGFSDCEKSADMRFFNR----PTDSQFQLFSECHKIINDAFTT---------------------GYCHPNNDFYSFPKISVNPHAFTEGGPAQFVNATSKEVVEWAAKLGLPLVFRWDDSNAQRKEYAGLYHEVAQAHGVDVSQVRHKLTLLVNQNVDGEAARAEARVYLEEFV-----RE----SY-SN-TDF------E-------------------------QKMGELL------SENAIGTYEESTQAARVAIECCGAADLLMSFESMEDKAQQRAVIDVVNANIV------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105024 for 2566 contacts (-40.9/contact) +
2D Compatibility (PS) -34108 + (NN) -17271 + (LL) 7308
1D Compatibility (HY) -5200 + (ID) 2200
Total energy: -156495.0 ( -60.99 by residue)
QMean score : 0.416
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