Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHIKFDYSKALRFFEERELDYL-----EPAVKAAHDSLHNGT---GAGNDALGWINL--PTDY----------------DKEEFARIKKATEKIH---------SDSDVLIVIGIGGSYLGARAAIETLNHSFYNVLEK--------------GARKTPQVFFAGNSISSSYLHDLIEVVGDRDFSVNVISKSGTTTEPAIAFRVFKELLIKKYGE-EGAKKRIYATTDKAKGALKTLSDNEGY---ETFVVPDDVGGRFSVLTAVGLLPIAVS-G-VDIDALMNGAAAASKDFDKPEL-KNNIAYQYAAARNVLYR-KGKVTELLISYEPGLQYFNEWWKQLFGESEGKDK----------KGIYPSSANFSTDLHSIGQYIQDGRRNLFETVIKVDKPRHNLTINKE-DVD---------LDGLNYLAGETVDFVNTKA----FEGTLLAHT--DGEVPNFVVEVPELDAYTFGYLVYFFEKAVAISGYLNGVNPFDQPGVEAYKANMFALLGKPGFEDKKAELEKRLND |
| 3QKI Chain:A ((45-554)) | --NFYMDLSRQR--YSEKTLNKLVEYAEEVELKKKVEKTFMGEKVNMTENRSVLHTALRIPIEKINTHKIIIDNKNVLEDVHGVLKKIEKYSDDIRNGVIKTCKNTKFKNVICIGIGGSYLGTEFVYEAMKYYYYNMELNKNEKDQVNNFNNNYDQDNVFNVRFL-ANVDPNDVNRAIQNLDQYDTLVIIISKTFTTAETMLNARSIKKWLSLKIKDDENLSKHMVAVSTN-L----KLTDEFGISRDNVFEFWDWVGGRFSVTSSVGILPLSIAFGYKNMRNFLNGCHDMDEHF-LHADLKENIPVLLALTSFYNSHFFDYKNVAILPYFQNLLKFSAHIQQLSMESNGKSVDRNNQPIHYNTCQVYFGEPGTNGQHSFYQLIHQGQ-VIPVELIGFKHSHFPIKFDKEVVSNHDELMTNFFAQADALAIGKTYEQVKEENEKNKMSPELLTHKVFNGNRPSTLLLFDELNFYTCGLLLSLYESRIVAEGFLLNINSFDQWGVELGKVLAKEVRNYFNDT------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158687 for 3394 contacts (-46.8/contact) +
2D Compatibility (PS) -46682 + (NN) -27811 + (LL) 1464
1D Compatibility (HY) -22400 + (ID) 5550
Total energy: -259666.0 ( -76.51 by residue)
QMean score : 0.487
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