Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKYNIRGENIEVTEPIRDYVEKKIDKLERYFTETPDANVHVNLKVYSDKNAKVEVTIPLPNLVLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNRKFRDKGAERDYFAYSDVNGSTPPEENEGDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVYSRKDGKYGLIETN
1IMU Chain:A ((1-99))
-MTLNITSKQMDITPAIREHLEERLAKLGKWQTQLISPHFVLNKVP---NGFSVEASIGTPLGNLLASATSDDMYKAINEVEEKLERQLNKLQHKSESRRADE------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1IMU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29455 for 718 contacts (-41.0/contact) +
2D Compatibility (PS) -10610 + (NN) -378 + (LL) 4180
1D Compatibility (HY) -3600 + (ID) 1450
Total energy: -41313.0 ( -57.54 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_1IMU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IMU-query.scw
PDB file :
Tito_Scwrl_1IMU.pdb
: