Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIRVPATTANL-----------GPGFDSCGLALT-LYLTLDIGA-EA-D-SWYIEHNIGGGIPHDETNVIIETA-LNLAPN-LTPHHLVMTCDIPPARGLGSSSAAVVAGIELANTLAELNLSKEEKVRIAAEIEGHPDNVAPAVLGNWVVGAKLDGEDFYVRHL-FPDCA--LIAFIPKAE-L-LTSESRGVLPDTLPFKEAVQASS-IANVMIAAILRNDMTLAGEMMERDL--WHEKYR------SQLVPHLAQIRDVAKN---QGAYAACLSGAGPTVLVFAPRNLANKLQTSLQTLEIDADVLLLDVEGSGAEVFR |
| 2GS8 Chain:A ((9-316)) | ITVTSYANIAIIKYWGKENQAKMIPSTSSISLTLENMFTTTSVSFLPDTATSDQFYINGI-LQN-DEEHTKISAIIDQFRQPGQAFVKMETQNNMPTAAGLSSSSSGLSALVKACDQLFDTQLDQKALAQKAKFASGS---SSRSFFGPVAAWDKDSGA--IYKVETDLKMAMIMLVLNAAKKPISSREGMKLCRDTSTTFDQWVEQSAIDYQHMLTYLKTNNFEKVGQLTEANALAMHATTKTANPPFSYLTKESYQAMEAVKELRQEGFACYFTMDAGPNVKVLCLEKDLAQLAERLGKN---YRIIVSKT-KDLPD--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GS8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175738 for 2207 contacts (-79.6/contact) +
2D Compatibility (PS) -29994 + (NN) -12366 + (LL) 392
1D Compatibility (HY) 400 + (ID) 2400
Total energy: -219706.0 ( -99.55 by residue)
QMean score : 0.428
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