Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VEAKLQVGVLGFGTVGSGVIHILEEHQEKISQVTGYNISVKKVLVRDLEKNR--------R--YETK-GFELTTNPSDVLD----DPEIAVVVEVMGSITTAREYILQALKAGKHVVTANKDLIALHGDELVAVA--QANNCDLFYEASVAGGIPILRTIVNSLA-ADKIQKVMGIVNGTTNFMLTKMTT---EKKSYEDVLAEAQALGFAESDPTNDVDGIDAARKMVIMTRLAFGMNVN-LDNVETNGIRGISPE---------------------DIEVAYQLGYKIKLVGTAEETNGTVNVNVGPVLLPKAHPLAGVNYENNAVFVTGAA-VGETMFYGPGAGELPTATSVVSDLITVAKNSRLGTNGNAFNSYKHETKHTPKEQVFSKYYLRLTMDDKTGTFLKLTQIFAEAGVGFDKILQQPYDDFTATVVIVTHSTSQAQLEQAIARVKDEPEMQMLAKYSVVEG |
| 1EBF Chain:A ((2-357)) | -TKVVNVAVIGAGVVGSAFLDQLLAMKSTI----TYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHLKTSPKPVILVDNTSSAY-IAGFYTKFVENGISIATPNKKAFSSDLATWKALFSNKPTNGFVYHEATVGAGLPIISFLREIIQTGDEVEKIEGIFSGTLSYIFNEFSTSQANDVKFSDVVKVAKKLGYTEPDPRDDLNGLDVARKVTIVGRIS-GVEVESPTSFPVQSLIPKPLESVKSADEFLEKLSDYDKDLTQLKKEAATENKVLRFIGKVDVA--TKSVSVGIEKYDYSHPFASLKGSDNVISIKTKRYTNPVVIQGAGAGAAVTAAGVLGDVIKIAQR----------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EBF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159140 for 2574 contacts (-61.8/contact) +
2D Compatibility (PS) -33330 + (NN) -4250 + (LL) 8200
1D Compatibility (HY) -14400 + (ID) 3800
Total energy: -206720.0 ( -80.31 by residue)
QMean score : 0.453
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