Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPIVNMTDMLKKALAGKYAVGQFNINNLEWTQAILKAAEAEKAPVILGVSEGAAKYMGGFKTVVKMTEGLVE---DLKITVPVAIHLDHGSSFDSCKAAIDAGFSSVMIDGSHHPIDENIAMTKQVVDYAHAKGVSVEAEIGTVGGDEDGVTGGINYA---DPQECLRVVKEANIDALAAALGSVHG--PYHGEPVLGFDEMKEISELTGAPLVLHGGSGIPEH---------------------QIKKAIELGHSKINVNTECQIVWTAAVREKLATDDKV-YDPRKVIGPGVDAIIKTVTEKIQEFGSNGKA |
| 3N9S Chain:B ((2-306)) | --LVKGNEILLKAHKEGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMG-----IDMAVGMVKIMCERYPHIPVALHLDHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLM------------AVLVNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLTNIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGGINKVNTDTDLRIAFIAEVR-KVANEDKSQFDLRKFFSPAQLALKNVVKERMKLLGSANK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N9S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113380 for 2270 contacts (-49.9/contact) +
2D Compatibility (PS) -29378 + (NN) -12073 + (LL) 308
1D Compatibility (HY) -22800 + (ID) 5850
Total energy: -183173.0 ( -80.69 by residue)
QMean score : 0.626
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