Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEA--VQIGFEDKRAILSNKPEQGHVAKANTTPKRFIREFRDVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGS-RYHRRPGSMGPVAPNRVFKNKLLPGRMGGEQITIQNLEIVKVDVEKNVLLVKGNVPGAKKALVQIKTATKAK |
3J7Y Chain:E ((95-305)) | FRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSK----GKMATLSVGGKTVSRFRKATSILEFYRELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTHRRPGAVATGDIGRVWPGTKMPGKMGNIYRTEYGLKVWRINTKHNIIYVNGSVPGHKNCLVKVKDSKLP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24583 for 1362 contacts (-18.0/contact) +
2D Compatibility (PS) -21509 + (NN) -2711 + (LL) -28
1D Compatibility (HY) -8800 + (ID) 2750
Total energy: -60381.0 ( -44.33 by residue)
QMean score : 0.365
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