Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIVAMNEVVKSFTG--DIILEKVSLQLEEGERVGLIGRNGEGKSTILKILKGTEGVDSGIVTSKK--------------GARIGLLEQLSSVDPNIIVEHYLRTSFGELEDMEKELRSLEAEMATNASEKLMNRYGDKMALFGELGGYEMDANLNKVVNGLGIGKLLSQSWGDLSGGEKTKTALAHLLLQKTDLLLLDEPTNHLDLMAVEWLTAFLQHY----SGTVLVVSHDRYFLDEVVEKMVELENRELIVYHTNFSGYLKEREERLLREFQDYKDQQKKIKKMQQAIKRLRQWAMQANPPNDAMFRRAKNMERALERMEKVKRPVLTQKQMQLQFDEAGRSGQEVVVMENLSKSFSEKTIVQEVSLQIRQGERVAIIGENGAGKSTLLKIMEGKVVPDDGVIKVGASVKIASLSQQMEELNEEMTVLDAFRDKVAVTEGEARQMLAGFMFYGEMVFRKVRNISGGERMRLRLAQFINMPVNTLILDEPTNHLDIASREVLEEAIRAFSGTIITVSHDRYFIDQLCSKVIWLENKQLTVYEGNYSYATSKRR |
| 1OXX Chain:K ((1-230)) | MVRIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMK----------------------------------MSKEEIRKRVEEVAKILDIHHVLNHFPRELSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQV-GKPEDLYD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124524 for 1688 contacts (-73.8/contact) +
2D Compatibility (PS) -22272 + (NN) -5867 + (LL) 27436
1D Compatibility (HY) -14000 + (ID) 2750
Total energy: -141977.0 ( -84.11 by residue)
QMean score : 0.477
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