Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRGYYDEISFDVNTTAKKMHLFLLRSIASYDVTPEQWSVLEGIEANEPISQKEIALWTKKDTPTVNRIVDVLLRKELIVREISTEDRRISLLSLTEKGRKETNELRDIVEVSCEKMFAGVERADLEQFTAILKNISTNIE
2GXG Chain:A ((8-141))
----RIQIMSTIAKIYRAMSRELNRRLGELNLSYLDFLVLRATS-DGPKTMAYLANRYFVTQSAITASVDKLEEMGLVVRVRDREDRRKILIEITEKGLETFNKGIEIYKKLANEVTGDLSEDEVILVLDKISKILKRI-
General information:
TITO was launched using:
RESULT:
Template:
2GXG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55427 for 854 contacts (-64.9/contact) +
2D Compatibility (PS) -14125 + (NN) -3542 + (LL) 476
1D Compatibility (HY) -4000 + (ID) 1350
Total energy: -77968.0 ( -91.30 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_2GXG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GXG-query.scw
PDB file :
Tito_Scwrl_2GXG.pdb
: